Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.62■□□□□ 0.57
COL4A2P08572 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.62■□□□□ 0.57
COL4A2P08572 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.62■□□□□ 0.57
COL4A2P08572 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 INTS4P1-201ENST00000438455 1935 ntBASIC18.62■□□□□ 0.57
COL4A2P08572 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 AL158211.5-201ENST00000623583 2518 ntBASIC18.62■□□□□ 0.57
COL4A2P08572 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.61■□□□□ 0.57
COL4A2P08572 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.61■□□□□ 0.57
COL4A2P08572 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL4A2P08572 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.61■□□□□ 0.57
COL4A2P08572 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.61■□□□□ 0.57
COL4A2P08572 MIR5100-201ENST00000579544 119 ntBASIC18.61■□□□□ 0.57
COL4A2P08572 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.61■□□□□ 0.57
COL4A2P08572 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.61■□□□□ 0.57
COL4A2P08572 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL4A2P08572 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.61■□□□□ 0.57
COL4A2P08572 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.61■□□□□ 0.57
COL4A2P08572 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.6■□□□□ 0.57
COL4A2P08572 SART3-203ENST00000546611 1184 ntBASIC18.6■□□□□ 0.57
COL4A2P08572 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.6■□□□□ 0.57
COL4A2P08572 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.6■□□□□ 0.57
COL4A2P08572 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.6■□□□□ 0.57
COL4A2P08572 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.6■□□□□ 0.57
COL4A2P08572 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COL4A2P08572 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
COL4A2P08572 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.6■□□□□ 0.57
COL4A2P08572 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.6■□□□□ 0.57
COL4A2P08572 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
COL4A2P08572 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.6■□□□□ 0.57
COL4A2P08572 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 BX842568.4-201ENST00000421222 227 ntBASIC18.6■□□□□ 0.57
COL4A2P08572 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.6■□□□□ 0.57
COL4A2P08572 AC012640.2-201ENST00000561606 901 ntBASIC18.6■□□□□ 0.57
COL4A2P08572 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL4A2P08572 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.6■□□□□ 0.57
COL4A2P08572 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL4A2P08572 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 TP73-AS1-210ENST00000637775 1455 ntBASIC18.59■□□□□ 0.57
COL4A2P08572 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.59■□□□□ 0.57
COL4A2P08572 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.59■□□□□ 0.57
COL4A2P08572 MIR1233-2-201ENST00000408138 82 ntBASIC18.59■□□□□ 0.57
COL4A2P08572 MIR1233-1-201ENST00000408722 82 ntBASIC18.59■□□□□ 0.57
COL4A2P08572 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 AC034105.1-201ENST00000563488 319 ntBASIC18.59■□□□□ 0.57
COL4A2P08572 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.59■□□□□ 0.57
COL4A2P08572 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.59■□□□□ 0.57
COL4A2P08572 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.59■□□□□ 0.57
COL4A2P08572 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL4A2P08572 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A2P08572 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.58■□□□□ 0.57
COL4A2P08572 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
COL4A2P08572 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL4A2P08572 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
COL4A2P08572 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms