Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 GCSHP2-201ENST00000560971 527 ntBASIC19.91■□□□□ 0.78
HLA-DRAP01903 AL441883.1-201ENST00000566170 1045 ntBASIC19.91■□□□□ 0.78
HLA-DRAP01903 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 AC010240.3-201ENST00000607688 395 ntBASIC19.91■□□□□ 0.78
HLA-DRAP01903 AC139887.4-201ENST00000607877 719 ntBASIC19.91■□□□□ 0.78
HLA-DRAP01903 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DRAP01903 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DRAP01903 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.9■□□□□ 0.78
HLA-DRAP01903 AC117947.1-201ENST00000427448 529 ntBASIC19.9■□□□□ 0.78
HLA-DRAP01903 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 AC140113.3-201ENST00000605663 199 ntBASIC19.9■□□□□ 0.78
HLA-DRAP01903 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 AC092865.7-201ENST00000641832 219 ntBASIC19.9■□□□□ 0.78
HLA-DRAP01903 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DRAP01903 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DRAP01903 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DRAP01903 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DRAP01903 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 YBX1P2-201ENST00000489612 999 ntBASIC19.89■□□□□ 0.77
HLA-DRAP01903 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 RN7SL850P-201ENST00000579959 291 ntBASIC19.89■□□□□ 0.77
HLA-DRAP01903 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 AC006011.2-201ENST00000621313 1158 ntBASIC19.89■□□□□ 0.77
HLA-DRAP01903 AC011558.1-201ENST00000623459 338 ntBASIC19.89■□□□□ 0.77
HLA-DRAP01903 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DRAP01903 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DRAP01903 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.88■□□□□ 0.77
HLA-DRAP01903 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DRAP01903 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms