Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.46■□□□□ 0.23
CNOT4O95628 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 AC112497.1-201ENST00000624824 639 ntBASIC16.46■□□□□ 0.23
CNOT4O95628 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.46■□□□□ 0.23
CNOT4O95628 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 AC008556.1-201ENST00000610908 2040 ntBASIC16.46■□□□□ 0.23
CNOT4O95628 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CNOT4O95628 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
CNOT4O95628 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNOT4O95628 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNOT4O95628 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNOT4O95628 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.46■□□□□ 0.22
CNOT4O95628 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.45■□□□□ 0.22
CNOT4O95628 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
CNOT4O95628 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 STARP1-201ENST00000397973 869 ntBASIC16.45■□□□□ 0.22
CNOT4O95628 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.45■□□□□ 0.22
CNOT4O95628 MIR3180-4-201ENST00000582223 153 ntBASIC16.45■□□□□ 0.22
CNOT4O95628 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CNOT4O95628 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNOT4O95628 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.45■□□□□ 0.22
CNOT4O95628 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNOT4O95628 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.44■□□□□ 0.22
CNOT4O95628 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT4O95628 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 AC098818.2-201ENST00000564925 2320 ntBASIC16.44■□□□□ 0.22
CNOT4O95628 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.44■□□□□ 0.22
CNOT4O95628 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.44■□□□□ 0.22
CNOT4O95628 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.44■□□□□ 0.22
CNOT4O95628 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.44■□□□□ 0.22
CNOT4O95628 AL441883.1-201ENST00000566170 1045 ntBASIC16.44■□□□□ 0.22
CNOT4O95628 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CNOT4O95628 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 AL023973.1-201ENST00000624619 620 ntBASIC16.44■□□□□ 0.22
CNOT4O95628 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
CNOT4O95628 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNOT4O95628 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT4O95628 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.44■□□□□ 0.22
CNOT4O95628 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
CNOT4O95628 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNOT4O95628 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT4O95628 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 KRT18P56-201ENST00000507275 550 ntBASIC16.43■□□□□ 0.22
CNOT4O95628 KRT18P41-201ENST00000518924 1277 ntBASIC16.43■□□□□ 0.22
CNOT4O95628 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.43■□□□□ 0.22
CNOT4O95628 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.43■□□□□ 0.22
CNOT4O95628 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.43■□□□□ 0.22
CNOT4O95628 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.43■□□□□ 0.22
CNOT4O95628 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNOT4O95628 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNOT4O95628 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms