Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRIM3O75382 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM3O75382 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM3O75382 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM3O75382 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM3O75382 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
TRIM3O75382 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM3O75382 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRIM3O75382 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM3O75382 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM3O75382 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM3O75382 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM3O75382 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM3O75382 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM3O75382 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM3O75382 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM3O75382 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM3O75382 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM3O75382 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM3O75382 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM3O75382 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM3O75382 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 KRT8P3-201ENST00000519669 1449 ntBASIC17.25■□□□□ 0.35
TRIM3O75382 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM3O75382 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM3O75382 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.25■□□□□ 0.35
TRIM3O75382 AL512604.3-201ENST00000569583 964 ntBASIC17.25■□□□□ 0.35
TRIM3O75382 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.25■□□□□ 0.35
TRIM3O75382 AC008622.2-201ENST00000617006 1229 ntBASIC17.25■□□□□ 0.35
TRIM3O75382 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TRIM3O75382 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TRIM3O75382 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRIM3O75382 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM3O75382 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM3O75382 FEM1AP3-201ENST00000403722 1741 ntBASIC17.24■□□□□ 0.35
TRIM3O75382 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM3O75382 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM3O75382 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRIM3O75382 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM3O75382 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM3O75382 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms