Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ZNF253O75346 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF253O75346 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ZNF253O75346 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.43□□□□□ -0.1
ZNF253O75346 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ZNF253O75346 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.43□□□□□ -0.1
ZNF253O75346 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ZNF253O75346 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ZNF253O75346 ABALON-201ENST00000629058 1903 ntBASIC14.43□□□□□ -0.1
ZNF253O75346 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZNF253O75346 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 AC011270.2-201ENST00000624293 2550 ntBASIC14.42□□□□□ -0.1
ZNF253O75346 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF253O75346 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF253O75346 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
ZNF253O75346 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.42□□□□□ -0.1
ZNF253O75346 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.42□□□□□ -0.1
ZNF253O75346 PRKY-204ENST00000533551 1019 ntBASIC14.42□□□□□ -0.1
ZNF253O75346 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.42□□□□□ -0.1
ZNF253O75346 AL160286.2-201ENST00000567150 934 ntBASIC14.42□□□□□ -0.1
ZNF253O75346 SOX15-203ENST00000570788 1093 ntBASIC14.42□□□□□ -0.1
ZNF253O75346 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.42□□□□□ -0.1
ZNF253O75346 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF253O75346 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF253O75346 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.42□□□□□ -0.1
ZNF253O75346 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ZNF253O75346 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 SIRPAP1-201ENST00000448467 1770 ntBASIC14.42□□□□□ -0.1
ZNF253O75346 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.42□□□□□ -0.1
ZNF253O75346 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZNF253O75346 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF253O75346 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ZNF253O75346 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 AC073592.3-201ENST00000625118 1834 ntBASIC14.41□□□□□ -0.1
ZNF253O75346 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF253O75346 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF253O75346 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF253O75346 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.41□□□□□ -0.1
ZNF253O75346 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF253O75346 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZNF253O75346 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF253O75346 PKD1P5-201ENST00000532415 10291 ntBASIC14.41□□□□□ -0.1
ZNF253O75346 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF253O75346 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms