Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF9O60383 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.98■□□□□ 0.47
GDF9O60383 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GDF9O60383 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF9O60383 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF9O60383 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.98■□□□□ 0.47
GDF9O60383 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
GDF9O60383 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF9O60383 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF9O60383 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.98■□□□□ 0.47
GDF9O60383 AC006333.2-201ENST00000607957 2099 ntBASIC17.98■□□□□ 0.47
GDF9O60383 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF9O60383 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
GDF9O60383 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
GDF9O60383 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GDF9O60383 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
GDF9O60383 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 METTL21AP1-201ENST00000438852 635 ntBASIC17.97■□□□□ 0.47
GDF9O60383 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 MIR3180-4-201ENST00000582223 153 ntBASIC17.97■□□□□ 0.47
GDF9O60383 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 AL596442.2-201ENST00000610240 980 ntBASIC17.97■□□□□ 0.47
GDF9O60383 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GDF9O60383 HLA-J-201ENST00000462773 1622 ntBASIC17.97■□□□□ 0.47
GDF9O60383 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
GDF9O60383 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.97■□□□□ 0.47
GDF9O60383 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.96■□□□□ 0.47
GDF9O60383 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
GDF9O60383 TP73-AS1-210ENST00000637775 1455 ntBASIC17.96■□□□□ 0.47
GDF9O60383 PKD1P6-201ENST00000343738 4769 ntBASIC17.96■□□□□ 0.47
GDF9O60383 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
GDF9O60383 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
GDF9O60383 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.96■□□□□ 0.47
GDF9O60383 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.96■□□□□ 0.47
GDF9O60383 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.96■□□□□ 0.47
GDF9O60383 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.96■□□□□ 0.47
GDF9O60383 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.96■□□□□ 0.47
GDF9O60383 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.96■□□□□ 0.47
GDF9O60383 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GDF9O60383 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
GDF9O60383 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.96■□□□□ 0.46
GDF9O60383 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GDF9O60383 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
GDF9O60383 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
GDF9O60383 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.95■□□□□ 0.46
GDF9O60383 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
GDF9O60383 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GDF9O60383 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.95■□□□□ 0.46
GDF9O60383 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.95■□□□□ 0.46
GDF9O60383 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms