Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 DRAXINP1-201ENST00000437611 948 ntBASIC18.35■□□□□ 0.53
PCDHGA12O60330 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 AL157888.1-201ENST00000631930 593 ntBASIC18.35■□□□□ 0.53
PCDHGA12O60330 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 AL391807.1-203ENST00000604392 2365 ntBASIC18.34■□□□□ 0.53
PCDHGA12O60330 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 TSPY22P-201ENST00000427496 604 ntBASIC18.34■□□□□ 0.53
PCDHGA12O60330 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.34■□□□□ 0.53
PCDHGA12O60330 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGA12O60330 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGA12O60330 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA12O60330 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA12O60330 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA12O60330 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDHGA12O60330 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGA12O60330 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHGA12O60330 KRT18P1-202ENST00000452408 1331 ntBASIC18.33■□□□□ 0.53
PCDHGA12O60330 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 TSPY19P-201ENST00000418461 509 ntBASIC18.33■□□□□ 0.52
PCDHGA12O60330 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA12O60330 TSPY18P-201ENST00000441642 509 ntBASIC18.33■□□□□ 0.52
PCDHGA12O60330 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHGA12O60330 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA12O60330 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGA12O60330 IFNL4P1-201ENST00000607083 540 ntBASIC18.33■□□□□ 0.52
PCDHGA12O60330 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA12O60330 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA12O60330 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.33■□□□□ 0.52
PCDHGA12O60330 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA12O60330 Z82202.1-201ENST00000623446 1880 ntBASIC18.33■□□□□ 0.52
PCDHGA12O60330 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 NEFHP1-201ENST00000412845 2629 ntBASIC18.32■□□□□ 0.52
PCDHGA12O60330 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 AL121772.3-201ENST00000610840 674 ntBASIC18.32■□□□□ 0.52
PCDHGA12O60330 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms