Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFDO43915 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.15■□□□□ 0.5
VEGFDO43915 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFDO43915 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFDO43915 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VEGFDO43915 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VEGFDO43915 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.15■□□□□ 0.5
VEGFDO43915 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.14■□□□□ 0.5
VEGFDO43915 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
VEGFDO43915 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
VEGFDO43915 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
VEGFDO43915 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.14■□□□□ 0.49
VEGFDO43915 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.14■□□□□ 0.49
VEGFDO43915 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.14■□□□□ 0.49
VEGFDO43915 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.14■□□□□ 0.49
VEGFDO43915 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.14■□□□□ 0.49
VEGFDO43915 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VEGFDO43915 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VEGFDO43915 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.14■□□□□ 0.49
VEGFDO43915 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VEGFDO43915 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.13■□□□□ 0.49
VEGFDO43915 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.13■□□□□ 0.49
VEGFDO43915 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
VEGFDO43915 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.13■□□□□ 0.49
VEGFDO43915 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.13■□□□□ 0.49
VEGFDO43915 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 FAM86EP-206ENST00000510506 987 ntBASIC18.13■□□□□ 0.49
VEGFDO43915 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.13■□□□□ 0.49
VEGFDO43915 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.13■□□□□ 0.49
VEGFDO43915 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.13■□□□□ 0.49
VEGFDO43915 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.13■□□□□ 0.49
VEGFDO43915 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.13■□□□□ 0.49
VEGFDO43915 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VEGFDO43915 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VEGFDO43915 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VEGFDO43915 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
VEGFDO43915 VENTXP5-201ENST00000523979 775 ntBASIC18.12■□□□□ 0.49
VEGFDO43915 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.12■□□□□ 0.49
VEGFDO43915 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.12■□□□□ 0.49
VEGFDO43915 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.12■□□□□ 0.49
VEGFDO43915 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
VEGFDO43915 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VEGFDO43915 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VEGFDO43915 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VEGFDO43915 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VEGFDO43915 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
VEGFDO43915 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VEGFDO43915 SDHAP2-201ENST00000455183 2001 ntBASIC18.11■□□□□ 0.49
VEGFDO43915 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
VEGFDO43915 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 MIR662-201ENST00000384847 95 ntBASIC18.11■□□□□ 0.49
VEGFDO43915 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VEGFDO43915 SPDYE13P-201ENST00000445314 798 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms