Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC28A2O43868 AL512604.3-201ENST00000569583 964 ntBASIC17.85■□□□□ 0.45
SLC28A2O43868 MIR3652-201ENST00000579335 131 ntBASIC17.85■□□□□ 0.45
SLC28A2O43868 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.85■□□□□ 0.45
SLC28A2O43868 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SLC28A2O43868 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 AL022342.1-201ENST00000400363 863 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 AC004980.1-204ENST00000429707 299 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 ATP5G2P1-201ENST00000433580 426 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 AC007663.1-201ENST00000438948 1240 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC28A2O43868 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 AL136038.3-201ENST00000561909 1096 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 AL023973.1-201ENST00000624619 620 ntBASIC17.84■□□□□ 0.45
SLC28A2O43868 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC28A2O43868 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC28A2O43868 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC28A2O43868 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC28A2O43868 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC28A2O43868 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.83■□□□□ 0.45
SLC28A2O43868 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC28A2O43868 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.83■□□□□ 0.45
SLC28A2O43868 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC28A2O43868 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC28A2O43868 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SLC28A2O43868 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SLC28A2O43868 MFAP1P1-201ENST00000442257 1255 ntBASIC17.83■□□□□ 0.44
SLC28A2O43868 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC28A2O43868 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC28A2O43868 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC28A2O43868 AP000692.2-201ENST00000608391 879 ntBASIC17.83■□□□□ 0.44
SLC28A2O43868 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC28A2O43868 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
SLC28A2O43868 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SLC28A2O43868 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SLC28A2O43868 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC28A2O43868 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 HTR7P1-202ENST00000624664 4411 ntBASIC17.82■□□□□ 0.44
SLC28A2O43868 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC28A2O43868 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC28A2O43868 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms