Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 NUS1P2-201ENST00000417358 873 ntBASIC19.79■□□□□ 0.76
HOXA2O43364 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 SAPCD2P3-201ENST00000455031 850 ntBASIC19.79■□□□□ 0.76
HOXA2O43364 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA2O43364 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HOXA2O43364 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.79■□□□□ 0.76
HOXA2O43364 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HOXA2O43364 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA2O43364 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA2O43364 AC009102.3-201ENST00000623118 1491 ntBASIC19.79■□□□□ 0.76
HOXA2O43364 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXA2O43364 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXA2O43364 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXA2O43364 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXA2O43364 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXA2O43364 AP005901.3-202ENST00000581653 237 ntBASIC19.78■□□□□ 0.76
HOXA2O43364 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HOXA2O43364 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXA2O43364 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HOXA2O43364 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HOXA2O43364 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXA2O43364 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXA2O43364 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HOXA2O43364 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXA2O43364 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXA2O43364 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HOXA2O43364 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXA2O43364 REXO1L6P-202ENST00000619970 1078 ntBASIC19.77■□□□□ 0.76
HOXA2O43364 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
HOXA2O43364 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXA2O43364 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.75
HOXA2O43364 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.75
HOXA2O43364 AC093484.2-201ENST00000580996 2166 ntBASIC19.77■□□□□ 0.75
HOXA2O43364 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXA2O43364 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HOXA2O43364 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 SLC25A6P4-201ENST00000586535 553 ntBASIC19.76■□□□□ 0.75
HOXA2O43364 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXA2O43364 AC064862.7-201ENST00000604520 867 ntBASIC19.76■□□□□ 0.75
HOXA2O43364 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXA2O43364 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXA2O43364 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA2O43364 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA2O43364 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA2O43364 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA2O43364 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms