Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.06■□□□□ 0.8
TNRC18O15417 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.06■□□□□ 0.8
TNRC18O15417 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
TNRC18O15417 LINC02560-201ENST00000596379 459 ntBASIC20.06■□□□□ 0.8
TNRC18O15417 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.06■□□□□ 0.8
TNRC18O15417 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.05■□□□□ 0.8
TNRC18O15417 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.05■□□□□ 0.8
TNRC18O15417 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TNRC18O15417 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TNRC18O15417 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.05■□□□□ 0.8
TNRC18O15417 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.05■□□□□ 0.8
TNRC18O15417 AL109659.2-201ENST00000606809 1674 ntBASIC20.05■□□□□ 0.8
TNRC18O15417 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.05■□□□□ 0.8
TNRC18O15417 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.05■□□□□ 0.8
TNRC18O15417 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.05■□□□□ 0.8
TNRC18O15417 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.05■□□□□ 0.8
TNRC18O15417 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 MIR3180-4-201ENST00000582223 153 ntBASIC20.05■□□□□ 0.8
TNRC18O15417 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TNRC18O15417 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNRC18O15417 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 MIR1909-201ENST00000411312 80 ntBASIC20.04■□□□□ 0.8
TNRC18O15417 KRT19P2-202ENST00000557173 1012 ntBASIC20.04■□□□□ 0.8
TNRC18O15417 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TNRC18O15417 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TNRC18O15417 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.04■□□□□ 0.8
TNRC18O15417 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.04■□□□□ 0.8
TNRC18O15417 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.04■□□□□ 0.8
TNRC18O15417 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.04■□□□□ 0.8
TNRC18O15417 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNRC18O15417 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.04■□□□□ 0.8
TNRC18O15417 AC091812.2-201ENST00000619081 385 ntBASIC20.04■□□□□ 0.8
TNRC18O15417 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.03■□□□□ 0.8
TNRC18O15417 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNRC18O15417 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.03■□□□□ 0.8
TNRC18O15417 AC108073.2-201ENST00000464002 357 ntBASIC20.03■□□□□ 0.8
TNRC18O15417 IGHV3-71-201ENST00000523324 359 ntBASIC20.03■□□□□ 0.8
TNRC18O15417 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.03■□□□□ 0.8
TNRC18O15417 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.03■□□□□ 0.8
TNRC18O15417 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNRC18O15417 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNRC18O15417 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNRC18O15417 AL358472.5-202ENST00000641448 1267 ntBASIC20.03■□□□□ 0.8
TNRC18O15417 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNRC18O15417 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.03■□□□□ 0.8
TNRC18O15417 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNRC18O15417 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.03■□□□□ 0.8
TNRC18O15417 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.02■□□□□ 0.8
TNRC18O15417 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TNRC18O15417 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TNRC18O15417 SPTSSB-204ENST00000617024 1292 ntBASIC20.02■□□□□ 0.8
TNRC18O15417 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNRC18O15417 Z98882.1-201ENST00000622160 2253 ntBASIC20.02■□□□□ 0.79
TNRC18O15417 AP005212.1-201ENST00000581547 1997 ntBASIC20.02■□□□□ 0.79
TNRC18O15417 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNRC18O15417 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNRC18O15417 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.01■□□□□ 0.79
TNRC18O15417 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.01■□□□□ 0.79
TNRC18O15417 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.01■□□□□ 0.79
TNRC18O15417 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNRC18O15417 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms