Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.33■□□□□ 0.36
KPNA4O00629 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.33■□□□□ 0.36
KPNA4O00629 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.33■□□□□ 0.36
KPNA4O00629 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.33■□□□□ 0.36
KPNA4O00629 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.33■□□□□ 0.36
KPNA4O00629 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
KPNA4O00629 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
KPNA4O00629 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.32■□□□□ 0.36
KPNA4O00629 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.32■□□□□ 0.36
KPNA4O00629 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.32■□□□□ 0.36
KPNA4O00629 AL031598.1-201ENST00000561511 1773 ntBASIC17.32■□□□□ 0.36
KPNA4O00629 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.32■□□□□ 0.36
KPNA4O00629 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
KPNA4O00629 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
KPNA4O00629 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.31■□□□□ 0.36
KPNA4O00629 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
KPNA4O00629 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.31■□□□□ 0.36
KPNA4O00629 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
KPNA4O00629 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.31■□□□□ 0.36
KPNA4O00629 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 AC084018.2-201ENST00000613093 2607 ntBASIC17.31■□□□□ 0.36
KPNA4O00629 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.31■□□□□ 0.36
KPNA4O00629 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KPNA4O00629 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
KPNA4O00629 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
KPNA4O00629 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
KPNA4O00629 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 Z98044.1-201ENST00000632503 1764 ntBASIC17.3■□□□□ 0.36
KPNA4O00629 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
KPNA4O00629 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KPNA4O00629 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
KPNA4O00629 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
KPNA4O00629 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KPNA4O00629 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.3■□□□□ 0.36
KPNA4O00629 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 TSPY21P-201ENST00000433481 731 ntBASIC17.3■□□□□ 0.36
KPNA4O00629 TSPY23P-201ENST00000440136 739 ntBASIC17.3■□□□□ 0.36
KPNA4O00629 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 AC006058.3-201ENST00000606217 1069 ntBASIC17.3■□□□□ 0.36
KPNA4O00629 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.3■□□□□ 0.36
KPNA4O00629 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.3■□□□□ 0.36
KPNA4O00629 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KPNA4O00629 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms