Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC125634.1-201ENST00000438758 1403 ntBASIC17.35■□□□□ 0.37
CACNA1AO00555 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CACNA1AO00555 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 DUX4L27-201ENST00000554796 1261 ntBASIC17.35■□□□□ 0.37
CACNA1AO00555 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 AL133338.1-201ENST00000565695 1517 ntBASIC17.35■□□□□ 0.37
CACNA1AO00555 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.35■□□□□ 0.37
CACNA1AO00555 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.35■□□□□ 0.37
CACNA1AO00555 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.35■□□□□ 0.37
CACNA1AO00555 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.35■□□□□ 0.37
CACNA1AO00555 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CACNA1AO00555 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.35■□□□□ 0.37
CACNA1AO00555 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CACNA1AO00555 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CACNA1AO00555 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
CACNA1AO00555 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA1AO00555 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.34■□□□□ 0.37
CACNA1AO00555 AC008556.1-201ENST00000610908 2040 ntBASIC17.34■□□□□ 0.37
CACNA1AO00555 AC073592.4-201ENST00000623827 446 ntBASIC17.34■□□□□ 0.37
CACNA1AO00555 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CACNA1AO00555 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA1AO00555 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CACNA1AO00555 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CACNA1AO00555 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.34■□□□□ 0.37
CACNA1AO00555 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA1AO00555 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CACNA1AO00555 AL589182.2-201ENST00000619332 1049 ntBASIC17.34■□□□□ 0.37
CACNA1AO00555 AC105339.1-204ENST00000636249 355 ntBASIC17.34■□□□□ 0.37
CACNA1AO00555 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA1AO00555 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CACNA1AO00555 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA1AO00555 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.33■□□□□ 0.37
CACNA1AO00555 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA1AO00555 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA1AO00555 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA1AO00555 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA1AO00555 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.33■□□□□ 0.36
CACNA1AO00555 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA1AO00555 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.33■□□□□ 0.36
CACNA1AO00555 AC108073.2-201ENST00000464002 357 ntBASIC17.33■□□□□ 0.36
CACNA1AO00555 AC067863.1-201ENST00000494933 530 ntBASIC17.33■□□□□ 0.36
CACNA1AO00555 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA1AO00555 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CACNA1AO00555 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CACNA1AO00555 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA1AO00555 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA1AO00555 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CACNA1AO00555 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA1AO00555 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA1AO00555 COX5BP8-201ENST00000416911 349 ntBASIC17.32■□□□□ 0.36
CACNA1AO00555 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.32■□□□□ 0.36
CACNA1AO00555 AL596325.1-201ENST00000563991 1082 ntBASIC17.32■□□□□ 0.36
CACNA1AO00555 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA1AO00555 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA1AO00555 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA1AO00555 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA1AO00555 AC244015.2-201ENST00000616358 1861 ntBASIC17.32■□□□□ 0.36
CACNA1AO00555 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA1AO00555 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA1AO00555 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CACNA1AO00555 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA1AO00555 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA1AO00555 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA1AO00555 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms