Protein–RNA interactions for Protein: H3BV60

TGFBR3L, Transforming growth factor-beta receptor type 3-like protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3LH3BV60 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 AC009102.3-201ENST00000623118 1491 ntBASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.23■□□□□ 0.35
TGFBR3LH3BV60 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 PVRIG2P-201ENST00000435460 978 ntBASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AC087388.1-201ENST00000571370 1112 ntBASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AC009113.1-201ENST00000570267 2443 ntBASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TGFBR3LH3BV60 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 ARMC10P1-201ENST00000313754 855 ntBASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFBR3LH3BV60 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TGFBR3LH3BV60 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 ZNF444P1-201ENST00000559497 298 ntBASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFBR3LH3BV60 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms