Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 AC007663.1-201ENST00000438948 1240 ntBASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 KRT18P22-201ENST00000402024 1347 ntBASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM90A9PA6NNJ1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 AC211429.1-201ENST00000415277 523 ntBASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 AC008622.2-201ENST00000617006 1229 ntBASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 AC133561.5-201ENST00000635547 218 ntBASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 MTMR9LP-203ENST00000426597 1545 ntBASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FAM90A9PA6NNJ1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 KRT8P32-201ENST00000512863 1461 ntBASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 INGX-201ENST00000359239 846 ntBASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms