Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SPDYE4A6NLX3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDYE4A6NLX3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 BICD1-207ENST00000551848 1962 ntBASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDYE4A6NLX3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 PCDHA12-202ENST00000613593 2588 ntBASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SPDYE4A6NLX3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms