Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 HTR7P1-202ENST00000624664 4411 ntBASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 KRT8P11-201ENST00000409686 1436 ntBASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 PHGDH-209ENST00000641074 1780 ntBASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TCRBV3S1A0A5B6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 LINC00602-201ENST00000629776 2065 ntBASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV3S1A0A5B6 AC011676.5-201ENST00000624864 2660 ntBASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 AC091874.3-201ENST00000512672 1195 ntBASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TCRBV3S1A0A5B6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 AC004911.1-201ENST00000416316 871 ntBASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 Z85996.1-201ENST00000494644 937 ntBASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 AL050303.2-201ENST00000619798 666 ntBASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 HLA-B-256ENST00000639848 1089 ntBASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms