Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 AF186192.3-201ENST00000583427 947 ntBASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 AC008622.2-201ENST00000617006 1229 ntBASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 GNAS-203ENST00000306120 1878 ntBASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 LINC00896-202ENST00000609602 2128 ntBASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV9S1A1TA0A576 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 SLC25A6P5-201ENST00000435663 894 ntBASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 B3GAT3P1-201ENST00000471720 806 ntBASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 MIR6786-201ENST00000616843 113 ntBASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV9S1A1TA0A576 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 AC128676.1-201ENST00000454392 318 ntBASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 C1QBPP2-201ENST00000528754 825 ntBASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TCRBV9S1A1TA0A576 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TCRBV9S1A1TA0A576 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TCRBV9S1A1TA0A576 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.64■□□□□ 0.58
TCRBV9S1A1TA0A576 FZD10-202ENST00000539839 3282 ntBASIC18.64■□□□□ 0.58
TCRBV9S1A1TA0A576 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 MESTP1-201ENST00000404287 994 ntBASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 AC073195.1-201ENST00000607241 877 ntBASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TCRBV9S1A1TA0A576 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms