Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC026471.1-201ENST00000564629 3026 ntBASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL353719.1-201ENST00000566847 864 ntBASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRBV6-4A0A1B0GX49 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 LETM1P2-201ENST00000597330 2178 ntBASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 BX088651.1-201ENST00000540551 451 ntBASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 FITM1-202ENST00000559294 800 ntBASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 C2orf69P3-201ENST00000565542 1120 ntBASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AL023803.3-201ENST00000615559 522 ntBASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC116562.4-202ENST00000641738 218 ntBASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRBV6-4A0A1B0GX49 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms