Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
TRAV19A0A0A6YYK7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 AP000867.3-201ENST00000524675 377 ntBASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRAV19A0A0A6YYK7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 TOB2P1-201ENST00000469761 992 ntBASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 KRT89P-201ENST00000620027 1478 ntBASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV19A0A0A6YYK7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 NUS1P1-201ENST00000446295 882 ntBASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV19A0A0A6YYK7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 GUSBP12-201ENST00000513727 720 ntBASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 AC111152.3-201ENST00000569699 673 ntBASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV19A0A0A6YYK7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 MIR149-201ENST00000384879 89 ntBASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 AC012615.1-201ENST00000565797 1299 ntBASIC19.1■□□□□ 0.65
TRAV19A0A0A6YYK7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms