Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC112777.1-201ENST00000540175 1423 ntBASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC124016.1-201ENST00000609552 612 ntBASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC110285.5-201ENST00000611501 352 ntBASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-7A0A0A0MS04 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-7A0A0A0MS04 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV6-7A0A0A0MS04 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRBV6-7A0A0A0MS04 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-7A0A0A0MS04 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 AL353708.3-201ENST00000610272 989 ntBASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 KRT8P45-201ENST00000414328 1447 ntBASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-7A0A0A0MS04 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 AL357033.4-201ENST00000617703 1807 ntBASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 AC084018.2-201ENST00000613093 2607 ntBASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRBV6-7A0A0A0MS04 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms