Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 KRT18P38-201ENST00000449496 1282 ntBASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 AL359075.1-203ENST00000462729 1002 ntBASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 SPDYE15P-201ENST00000424157 909 ntBASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 AL157888.1-201ENST00000631930 593 ntBASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 AP000974.1-201ENST00000623909 2387 ntBASIC18.15■□□□□ 0.5
DNMT3AQ9Y6K1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
DNMT3AQ9Y6K1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.14■□□□□ 0.5
DNMT3AQ9Y6K1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DNMT3AQ9Y6K1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DNMT3AQ9Y6K1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 PVRIG2P-201ENST00000435460 978 ntBASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 AC112907.2-201ENST00000448639 330 ntBASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 KRT18P35-201ENST00000510488 1269 ntBASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 HYMAI.1-201ENST00000620949 238 ntBASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DNMT3AQ9Y6K1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 MIR149-201ENST00000384879 89 ntBASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 AL031133.1-201ENST00000406807 723 ntBASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 AL671277.2-201ENST00000458060 996 ntBASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 AL445228.2-201ENST00000605589 952 ntBASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.13■□□□□ 0.49
DNMT3AQ9Y6K1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms