Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGA9Q9Y5G4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AC246785.2-201ENST00000432512 513 ntBASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AP002383.4-201ENST00000442518 975 ntBASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 FDX1P1-201ENST00000449115 551 ntBASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGA9Q9Y5G4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 KRT8P3-201ENST00000519669 1449 ntBASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 AP002414.4-201ENST00000589764 1148 ntBASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 AC112497.1-201ENST00000624824 639 ntBASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGA9Q9Y5G4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 MIR662-201ENST00000384847 95 ntBASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 MIR3917-201ENST00000580971 93 ntBASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 AL136038.4-201ENST00000603606 1261 ntBASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGA9Q9Y5G4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms