Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 HCG4P8-203ENST00000443049 980 ntBASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 AC069148.1-201ENST00000608741 768 ntBASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 AC083906.6-201ENST00000641366 219 ntBASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB11Q9Y5F2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 RCC2P3-201ENST00000418112 1537 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 AL023284.2-201ENST00000405850 579 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 MCCD1P1-208ENST00000445732 328 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 VENTXP5-201ENST00000523979 775 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 AL441883.1-201ENST00000566170 1045 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 NEK4P2-201ENST00000580004 1012 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 GPAT2P1-201ENST00000444924 1672 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 KRT8P45-201ENST00000414328 1447 ntBASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB11Q9Y5F2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
PCDHB11Q9Y5F2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB11Q9Y5F2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB11Q9Y5F2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHB11Q9Y5F2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB11Q9Y5F2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB11Q9Y5F2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 AL121894.2-201ENST00000602977 491 ntBASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 AC068587.9-201ENST00000641814 219 ntBASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB11Q9Y5F2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms