Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 AC211429.1-201ENST00000415277 523 ntBASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 AC009065.1-201ENST00000564055 1225 ntBASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 AC005363.2-201ENST00000618631 242 ntBASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 AC073508.3-201ENST00000619697 1419 ntBASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 AC024243.1-201ENST00000609234 778 ntBASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGC3Q9UN70 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 TERF1P1-201ENST00000311003 1181 ntBASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 LINC01023-201ENST00000606054 436 ntBASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGC3Q9UN70 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PCDHGC3Q9UN70 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGC3Q9UN70 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGC3Q9UN70 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGC3Q9UN70 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGC3Q9UN70 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms