Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 KRT18P16-201ENST00000510337 1294 ntBASIC16.29■□□□□ 0.2
DUX4Q9UBX2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
DUX4Q9UBX2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 CROCCP3-202ENST00000420820 1947 ntBASIC16.27■□□□□ 0.2
DUX4Q9UBX2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 TUBB8P6-201ENST00000436895 1288 ntBASIC16.27■□□□□ 0.2
DUX4Q9UBX2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.27■□□□□ 0.2
DUX4Q9UBX2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DUX4Q9UBX2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.26■□□□□ 0.19
DUX4Q9UBX2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms