Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE7Q9UBL6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE7Q9UBL6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE7Q9UBL6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE7Q9UBL6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE7Q9UBL6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 AP000593.1-201ENST00000393668 712 ntBASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 AC011498.5-201ENST00000592027 486 ntBASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 AC026471.1-201ENST00000564629 3026 ntBASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE7Q9UBL6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE7Q9UBL6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE7Q9UBL6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE7Q9UBL6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms