Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 AC011498.5-201ENST00000592027 486 ntBASIC19.94■□□□□ 0.78
CNTN3Q9P232 AC069148.1-201ENST00000608741 768 ntBASIC19.94■□□□□ 0.78
CNTN3Q9P232 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.93■□□□□ 0.78
CNTN3Q9P232 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNTN3Q9P232 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNTN3Q9P232 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.92■□□□□ 0.78
CNTN3Q9P232 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 MYLKP1-201ENST00000509077 1580 ntBASIC19.91■□□□□ 0.78
CNTN3Q9P232 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTN3Q9P232 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTN3Q9P232 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 MIR149-201ENST00000384879 89 ntBASIC19.91■□□□□ 0.78
CNTN3Q9P232 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTN3Q9P232 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTN3Q9P232 AL499627.1-201ENST00000569373 2188 ntBASIC19.91■□□□□ 0.78
CNTN3Q9P232 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNTN3Q9P232 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.91■□□□□ 0.78
CNTN3Q9P232 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 AC093458.2-201ENST00000623150 629 ntBASIC19.9■□□□□ 0.78
CNTN3Q9P232 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNTN3Q9P232 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CNTN3Q9P232 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
CNTN3Q9P232 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CNTN3Q9P232 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTN3Q9P232 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTN3Q9P232 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTN3Q9P232 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNTN3Q9P232 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.89■□□□□ 0.77
CNTN3Q9P232 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms