Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 AC009533.2-201ENST00000543664 586 ntBASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 AC092865.5-201ENST00000545435 363 ntBASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 MTDHP3-201ENST00000594186 672 ntBASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 AP001269.4-201ENST00000609611 512 ntBASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLC52A1Q9NWF4 INTS4P1-201ENST00000438455 1935 ntBASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 MIR1233-2-201ENST00000408138 82 ntBASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 MIR1233-1-201ENST00000408722 82 ntBASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 AC116407.3-201ENST00000623905 1129 ntBASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC26.47■■□□□ 1.83
SLC52A1Q9NWF4 ZNF259P1-201ENST00000407656 1365 ntBASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AC092183.1-201ENST00000469884 875 ntBASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 TERC-201ENST00000602385 541 ntBASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 AL138831.2-201ENST00000606564 490 ntBASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC52A1Q9NWF4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
SLC52A1Q9NWF4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC26.45■■□□□ 1.83
SLC52A1Q9NWF4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLC52A1Q9NWF4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SLC52A1Q9NWF4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC26.45■■□□□ 1.83
SLC52A1Q9NWF4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 AC009102.3-201ENST00000623118 1491 ntBASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 RPS2P28-201ENST00000314255 741 ntBASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC52A1Q9NWF4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 BX842568.4-201ENST00000421222 227 ntBASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 AC145285.3-201ENST00000564603 959 ntBASIC26.44■■□□□ 1.82
SLC52A1Q9NWF4 AC011467.2-201ENST00000598425 242 ntBASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms