Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 ANO7L1-203ENST00000602586 1720 ntBASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 HLA-A-209ENST00000638375 975 ntBASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 MYC-208ENST00000641036 567 ntBASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB16Q9NRJ7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 AC068880.1-201ENST00000507289 2297 ntBASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 AC046158.3-201ENST00000624947 2558 ntBASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 TSPY23P-201ENST00000440136 739 ntBASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 RNA5SP413-201ENST00000516373 109 ntBASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB16Q9NRJ7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 CROCCP1-201ENST00000426910 5675 ntBASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 AC008894.3-201ENST00000624324 3103 ntBASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB16Q9NRJ7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms