Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 ELK2BP-201ENST00000415014 1224 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.18■□□□□ 0.34
CHD8Q9HCK8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 AC133561.1-201ENST00000568600 2415 ntBASIC17.17■□□□□ 0.34
CHD8Q9HCK8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHD8Q9HCK8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AP005212.1-201ENST00000581547 1997 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 CR383656.12-201ENST00000549567 513 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 GPR89P-201ENST00000407924 1495 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AC112777.1-201ENST00000540175 1423 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AC236430.1-201ENST00000402231 743 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.16■□□□□ 0.34
CHD8Q9HCK8 SDHAP1-207ENST00000440850 2000 ntBASIC17.16■□□□□ 0.34
CHD8Q9HCK8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 AC073592.5-201ENST00000624854 528 ntBASIC17.15■□□□□ 0.34
CHD8Q9HCK8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.15■□□□□ 0.34
CHD8Q9HCK8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms