Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 AP005117.1-201ENST00000584346 1413 ntBASIC22.25■■□□□ 1.15
VPS33BQ9H267 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS33BQ9H267 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS33BQ9H267 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS33BQ9H267 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 AL138831.2-201ENST00000606564 490 ntBASIC22.25■■□□□ 1.15
VPS33BQ9H267 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VPS33BQ9H267 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS33BQ9H267 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS33BQ9H267 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS33BQ9H267 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.24■■□□□ 1.15
VPS33BQ9H267 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 AL591424.1-201ENST00000442569 1213 ntBASIC22.24■■□□□ 1.15
VPS33BQ9H267 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 AC027601.4-201ENST00000611259 610 ntBASIC22.24■■□□□ 1.15
VPS33BQ9H267 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS33BQ9H267 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS33BQ9H267 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33BQ9H267 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33BQ9H267 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33BQ9H267 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 AC009154.2-201ENST00000621177 724 ntBASIC22.23■■□□□ 1.15
VPS33BQ9H267 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33BQ9H267 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS33BQ9H267 LINC01006-201ENST00000333319 2292 ntBASIC22.23■■□□□ 1.15
VPS33BQ9H267 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS33BQ9H267 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 MTMR9LP-203ENST00000426597 1545 ntBASIC22.22■■□□□ 1.15
VPS33BQ9H267 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS33BQ9H267 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.22■■□□□ 1.15
VPS33BQ9H267 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 MIR940-201ENST00000401276 94 ntBASIC22.22■■□□□ 1.15
VPS33BQ9H267 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.22■■□□□ 1.15
VPS33BQ9H267 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.22■■□□□ 1.15
VPS33BQ9H267 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.22■■□□□ 1.15
VPS33BQ9H267 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VPS33BQ9H267 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS33BQ9H267 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.21■■□□□ 1.15
VPS33BQ9H267 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.21■■□□□ 1.15
VPS33BQ9H267 ABCD1P5-201ENST00000445663 754 ntBASIC22.21■■□□□ 1.15
VPS33BQ9H267 AC021087.4-201ENST00000563761 564 ntBASIC22.21■■□□□ 1.15
VPS33BQ9H267 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VPS33BQ9H267 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.21■■□□□ 1.15
VPS33BQ9H267 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms