Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.05■□□□□ 0.8
CDT1Q9H211 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.05■□□□□ 0.8
CDT1Q9H211 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.05■□□□□ 0.8
CDT1Q9H211 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.05■□□□□ 0.8
CDT1Q9H211 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.05■□□□□ 0.8
CDT1Q9H211 BX323043.1-201ENST00000641006 1765 ntBASIC20.05■□□□□ 0.8
CDT1Q9H211 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.05■□□□□ 0.8
CDT1Q9H211 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.05■□□□□ 0.8
CDT1Q9H211 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.05■□□□□ 0.8
CDT1Q9H211 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.04■□□□□ 0.8
CDT1Q9H211 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.04■□□□□ 0.8
CDT1Q9H211 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.04■□□□□ 0.8
CDT1Q9H211 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDT1Q9H211 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
CDT1Q9H211 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.04■□□□□ 0.8
CDT1Q9H211 AC009102.3-201ENST00000623118 1491 ntBASIC20.04■□□□□ 0.8
CDT1Q9H211 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDT1Q9H211 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.03■□□□□ 0.8
CDT1Q9H211 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 AC120498.9-201ENST00000339021 3867 ntBASIC20.03■□□□□ 0.8
CDT1Q9H211 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.03■□□□□ 0.8
CDT1Q9H211 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 RNF126P1-202ENST00000569893 925 ntBASIC20.03■□□□□ 0.8
CDT1Q9H211 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.03■□□□□ 0.8
CDT1Q9H211 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.03■□□□□ 0.8
CDT1Q9H211 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDT1Q9H211 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 AC005082.1-201ENST00000413042 2259 ntBASIC20.02■□□□□ 0.8
CDT1Q9H211 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDT1Q9H211 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.02■□□□□ 0.8
CDT1Q9H211 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 SDHAP2-201ENST00000455183 2001 ntBASIC20.02■□□□□ 0.8
CDT1Q9H211 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.02■□□□□ 0.8
CDT1Q9H211 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.02■□□□□ 0.8
CDT1Q9H211 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.02■□□□□ 0.8
CDT1Q9H211 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.02■□□□□ 0.8
CDT1Q9H211 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.02■□□□□ 0.8
CDT1Q9H211 AC011498.5-201ENST00000592027 486 ntBASIC20.02■□□□□ 0.8
CDT1Q9H211 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.02■□□□□ 0.8
CDT1Q9H211 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDT1Q9H211 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDT1Q9H211 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.02■□□□□ 0.79
CDT1Q9H211 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDT1Q9H211 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDT1Q9H211 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.02■□□□□ 0.79
CDT1Q9H211 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
CDT1Q9H211 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.01■□□□□ 0.79
CDT1Q9H211 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDT1Q9H211 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDT1Q9H211 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDT1Q9H211 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.01■□□□□ 0.79
CDT1Q9H211 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms