Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 BX664615.1-201ENST00000443558 458 ntBASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 COX11P1-201ENST00000489116 835 ntBASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 AC024243.1-201ENST00000609234 778 ntBASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 AL031432.5-201ENST00000641059 760 ntBASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 AC005082.1-201ENST00000413042 2259 ntBASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1EQ9GZS1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 KRT18P57-201ENST00000443599 1254 ntBASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR1EQ9GZS1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 SEC1P-202ENST00000473944 940 ntBASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 AC009065.1-201ENST00000564055 1225 ntBASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 MIR3180-4-201ENST00000582223 153 ntBASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 AC092865.7-201ENST00000641832 219 ntBASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
POLR1EQ9GZS1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1EQ9GZS1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1EQ9GZS1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1EQ9GZS1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1EQ9GZS1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR1EQ9GZS1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 AL163051.1-201ENST00000569214 1512 ntBASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.76■□□□□ 0.59
POLR1EQ9GZS1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms