Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 MCCD1P1-208ENST00000445732 328 ntBASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 CA15P1-201ENST00000481698 905 ntBASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 AC026471.5-201ENST00000615068 467 ntBASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 AC036111.1-201ENST00000533973 1582 ntBASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.05■□□□□ 0.32
RSPO3Q9BXY4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 AL096828.2-201ENST00000567259 1965 ntBASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 AC134043.2-201ENST00000624206 2238 ntBASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RSPO3Q9BXY4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 AC034236.2-201ENST00000606662 1610 ntBASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 AP003071.4-201ENST00000562276 1284 ntBASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RSPO3Q9BXY4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 TSPY7P-201ENST00000431358 1114 ntBASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 RBM17P1-201ENST00000453646 1190 ntBASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 AP005242.2-201ENST00000580065 1175 ntBASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO3Q9BXY4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms