Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 FEM1AP3-201ENST00000403722 1741 ntBASIC12.91□□□□□ -0.34
UPK3BQ9BT76 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AC141586.3-201ENST00000562166 1838 ntBASIC12.91□□□□□ -0.34
UPK3BQ9BT76 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 FAM8A6P-201ENST00000407496 1135 ntBASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 MCCD1P1-208ENST00000445732 328 ntBASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 MIR4674-201ENST00000582457 87 ntBASIC12.91□□□□□ -0.34
UPK3BQ9BT76 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AC139887.4-201ENST00000607877 719 ntBASIC12.91□□□□□ -0.34
UPK3BQ9BT76 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
UPK3BQ9BT76 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 TSPY5P-201ENST00000426936 936 ntBASIC12.9□□□□□ -0.34
UPK3BQ9BT76 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 KRT18P35-201ENST00000510488 1269 ntBASIC12.9□□□□□ -0.34
UPK3BQ9BT76 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 AL445228.2-201ENST00000605589 952 ntBASIC12.9□□□□□ -0.34
UPK3BQ9BT76 AC140113.3-201ENST00000605663 199 ntBASIC12.9□□□□□ -0.34
UPK3BQ9BT76 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 AC008622.2-201ENST00000617006 1229 ntBASIC12.9□□□□□ -0.34
UPK3BQ9BT76 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
UPK3BQ9BT76 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms