Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC30.65■■■□□ 2.5
IFT140Q96RY7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC30.65■■■□□ 2.5
IFT140Q96RY7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
IFT140Q96RY7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
IFT140Q96RY7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC30.64■■■□□ 2.5
IFT140Q96RY7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
IFT140Q96RY7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
IFT140Q96RY7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
IFT140Q96RY7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
IFT140Q96RY7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC30.64■■■□□ 2.5
IFT140Q96RY7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.49
IFT140Q96RY7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
IFT140Q96RY7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC30.64■■■□□ 2.49
IFT140Q96RY7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.49
IFT140Q96RY7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC30.64■■■□□ 2.49
IFT140Q96RY7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC30.64■■■□□ 2.49
IFT140Q96RY7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
IFT140Q96RY7 AL645939.2-201ENST00000427340 991 ntBASIC30.63■■■□□ 2.49
IFT140Q96RY7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 AC002310.6-201ENST00000624451 1377 ntBASIC30.63■■■□□ 2.49
IFT140Q96RY7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
IFT140Q96RY7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC30.63■■■□□ 2.49
IFT140Q96RY7 AC005829.1-201ENST00000570002 483 ntBASIC30.63■■■□□ 2.49
IFT140Q96RY7 NKAPP1-205ENST00000585790 367 ntBASIC30.63■■■□□ 2.49
IFT140Q96RY7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 MIR4469-201ENST00000583919 79 ntBASIC30.62■■■□□ 2.49
IFT140Q96RY7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
IFT140Q96RY7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
IFT140Q96RY7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
IFT140Q96RY7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
IFT140Q96RY7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
IFT140Q96RY7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC30.61■■■□□ 2.49
IFT140Q96RY7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
IFT140Q96RY7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
IFT140Q96RY7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC30.61■■■□□ 2.49
IFT140Q96RY7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC30.61■■■□□ 2.49
IFT140Q96RY7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
IFT140Q96RY7 TCF3P1-201ENST00000423021 1937 ntBASIC30.61■■■□□ 2.49
IFT140Q96RY7 AL391422.3-201ENST00000603791 2761 ntBASIC30.61■■■□□ 2.49
IFT140Q96RY7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
IFT140Q96RY7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
IFT140Q96RY7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 AC008687.5-201ENST00000593746 558 ntBASIC30.6■■■□□ 2.49
IFT140Q96RY7 AC011467.4-201ENST00000594891 528 ntBASIC30.6■■■□□ 2.49
IFT140Q96RY7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC30.6■■■□□ 2.49
IFT140Q96RY7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
IFT140Q96RY7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
IFT140Q96RY7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
IFT140Q96RY7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 SNHG9-202ENST00000564014 471 ntBASIC30.59■■■□□ 2.49
IFT140Q96RY7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
IFT140Q96RY7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC30.59■■■□□ 2.49
IFT140Q96RY7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
IFT140Q96RY7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
IFT140Q96RY7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
IFT140Q96RY7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC30.58■■■□□ 2.49
IFT140Q96RY7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC30.58■■■□□ 2.49
IFT140Q96RY7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC30.58■■■□□ 2.49
IFT140Q96RY7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC30.58■■■□□ 2.49
IFT140Q96RY7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC30.58■■■□□ 2.49
IFT140Q96RY7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
IFT140Q96RY7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms