Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 AC009065.1-201ENST00000564055 1225 ntBASIC13.7□□□□□ -0.22
ODF3Q96PU9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 HOXB1-202ENST00000577092 1414 ntBASIC13.7□□□□□ -0.22
ODF3Q96PU9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ODF3Q96PU9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF3Q96PU9 AC090340.1-201ENST00000620778 4980 ntBASIC13.7□□□□□ -0.22
ODF3Q96PU9 AC005332.8-201ENST00000622750 2735 ntBASIC13.7□□□□□ -0.22
ODF3Q96PU9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF3Q96PU9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 NOC2LP2-201ENST00000407594 1944 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 CRYGFP-201ENST00000418459 633 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 AL158047.1-201ENST00000445918 881 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 TSPY17P-201ENST00000450329 467 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.69□□□□□ -0.22
ODF3Q96PU9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.69□□□□□ -0.22
ODF3Q96PU9 AC026471.5-201ENST00000615068 467 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 KRT8P50-201ENST00000562022 1438 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ODF3Q96PU9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF3Q96PU9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 AC093677.2-201ENST00000600169 1863 ntBASIC13.69□□□□□ -0.22
ODF3Q96PU9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF3Q96PU9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF3Q96PU9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 AC020763.4-201ENST00000623414 4170 ntBASIC13.68□□□□□ -0.22
ODF3Q96PU9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 MIR718-201ENST00000390190 70 ntBASIC13.68□□□□□ -0.22
ODF3Q96PU9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.68□□□□□ -0.22
ODF3Q96PU9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ODF3Q96PU9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ODF3Q96PU9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms