Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.31■□□□□ 0.36
MS4A4EQ96PG1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 TSPY15P-201ENST00000457163 923 ntBASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 AC128688.1-201ENST00000487626 519 ntBASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 NAPSB-206ENST00000562112 1266 ntBASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 CR769767.2-201ENST00000622735 460 ntBASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 KRT8P50-201ENST00000562022 1438 ntBASIC17.3■□□□□ 0.36
MS4A4EQ96PG1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 MMP23A-201ENST00000234610 1017 ntBASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 LETM1P2-201ENST00000597330 2178 ntBASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 KRT8P7-201ENST00000533003 1432 ntBASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MS4A4EQ96PG1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 AL596275.1-201ENST00000423464 877 ntBASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 AC066615.1-201ENST00000640911 628 ntBASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 KRT8P9-201ENST00000558927 1449 ntBASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 HOXB1-202ENST00000577092 1414 ntBASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A4EQ96PG1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 CYP2D8P-201ENST00000433633 1490 ntBASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A4EQ96PG1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms