Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 PCDHB18P-201ENST00000524813 2368 ntBASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
RPGRIP1Q96KN7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 AC004951.3-201ENST00000418645 1148 ntBASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 SLC25A1P2-201ENST00000430693 912 ntBASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 AL671277.2-201ENST00000458060 996 ntBASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 AL359075.1-203ENST00000462729 1002 ntBASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RPGRIP1Q96KN7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 YBX1P10-201ENST00000444752 975 ntBASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 HOMER2P1-201ENST00000455653 964 ntBASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 AC010653.2-201ENST00000623505 997 ntBASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RPGRIP1Q96KN7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 AC018470.1-201ENST00000624790 3129 ntBASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 KRT18P16-201ENST00000510337 1294 ntBASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 AC140113.3-201ENST00000605663 199 ntBASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 AL031432.5-201ENST00000641059 760 ntBASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RPGRIP1Q96KN7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPGRIP1Q96KN7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms