Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPNE4Q96A23 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CPNE4Q96A23 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 AP000593.1-201ENST00000393668 712 ntBASIC16.64■□□□□ 0.25
CPNE4Q96A23 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 AC063952.2-201ENST00000498792 1227 ntBASIC16.64■□□□□ 0.25
CPNE4Q96A23 KRT18P41-201ENST00000518924 1277 ntBASIC16.64■□□□□ 0.25
CPNE4Q96A23 AL441883.1-201ENST00000566170 1045 ntBASIC16.64■□□□□ 0.25
CPNE4Q96A23 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 AC024243.1-201ENST00000609234 778 ntBASIC16.64■□□□□ 0.25
CPNE4Q96A23 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 AL590326.2-201ENST00000625139 305 ntBASIC16.64■□□□□ 0.25
CPNE4Q96A23 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPNE4Q96A23 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.64■□□□□ 0.25
CPNE4Q96A23 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 AC022616.7-201ENST00000525383 220 ntBASIC16.63■□□□□ 0.25
CPNE4Q96A23 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 GCSHP2-201ENST00000560971 527 ntBASIC16.63■□□□□ 0.25
CPNE4Q96A23 AC009065.1-201ENST00000564055 1225 ntBASIC16.63■□□□□ 0.25
CPNE4Q96A23 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 AC093525.10-201ENST00000625130 1569 ntBASIC16.63■□□□□ 0.25
CPNE4Q96A23 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.63■□□□□ 0.25
CPNE4Q96A23 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CPNE4Q96A23 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPNE4Q96A23 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE4Q96A23 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE4Q96A23 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.62■□□□□ 0.25
CPNE4Q96A23 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CPNE4Q96A23 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE4Q96A23 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPNE4Q96A23 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.62■□□□□ 0.25
CPNE4Q96A23 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms