Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.01■□□□□ 0.47
NCLNQ969V3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCLNQ969V3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NCLNQ969V3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18■□□□□ 0.47
NCLNQ969V3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
NCLNQ969V3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
NCLNQ969V3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18■□□□□ 0.47
NCLNQ969V3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18■□□□□ 0.47
NCLNQ969V3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NCLNQ969V3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18■□□□□ 0.47
NCLNQ969V3 AC116562.2-201ENST00000507042 360 ntBASIC18■□□□□ 0.47
NCLNQ969V3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18■□□□□ 0.47
NCLNQ969V3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18■□□□□ 0.47
NCLNQ969V3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18■□□□□ 0.47
NCLNQ969V3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18■□□□□ 0.47
NCLNQ969V3 MIR6786-201ENST00000616843 113 ntBASIC18■□□□□ 0.47
NCLNQ969V3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18■□□□□ 0.47
NCLNQ969V3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18■□□□□ 0.47
NCLNQ969V3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NCLNQ969V3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCLNQ969V3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18■□□□□ 0.47
NCLNQ969V3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NCLNQ969V3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NCLNQ969V3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.99■□□□□ 0.47
NCLNQ969V3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.99■□□□□ 0.47
NCLNQ969V3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.99■□□□□ 0.47
NCLNQ969V3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.99■□□□□ 0.47
NCLNQ969V3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCLNQ969V3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.99■□□□□ 0.47
NCLNQ969V3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLNQ969V3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
NCLNQ969V3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLNQ969V3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 RBM17P1-201ENST00000453646 1190 ntBASIC17.98■□□□□ 0.47
NCLNQ969V3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.98■□□□□ 0.47
NCLNQ969V3 AC011506.1-201ENST00000474329 610 ntBASIC17.98■□□□□ 0.47
NCLNQ969V3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NCLNQ969V3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.98■□□□□ 0.47
NCLNQ969V3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.98■□□□□ 0.47
NCLNQ969V3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NCLNQ969V3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NCLNQ969V3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCLNQ969V3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NCLNQ969V3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLNQ969V3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLNQ969V3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLNQ969V3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCLNQ969V3 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.97■□□□□ 0.47
NCLNQ969V3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NCLNQ969V3 RCC2P6-201ENST00000526625 1557 ntBASIC17.97■□□□□ 0.47
NCLNQ969V3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCLNQ969V3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms