Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 AC004980.1-204ENST00000429707 299 ntBASIC14.66□□□□□ -0.06
NPIPB3Q92617 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 ESRRAP1-201ENST00000400596 1257 ntBASIC14.65□□□□□ -0.06
NPIPB3Q92617 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 NIFKP9-201ENST00000419265 221 ntBASIC14.65□□□□□ -0.06
NPIPB3Q92617 AP002982.1-201ENST00000492365 877 ntBASIC14.65□□□□□ -0.06
NPIPB3Q92617 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB3Q92617 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB3Q92617 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
NPIPB3Q92617 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 AC135776.1-201ENST00000319817 2481 ntBASIC14.64□□□□□ -0.07
NPIPB3Q92617 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 AC004951.3-201ENST00000418645 1148 ntBASIC14.64□□□□□ -0.07
NPIPB3Q92617 AC133681.1-201ENST00000465482 601 ntBASIC14.64□□□□□ -0.07
NPIPB3Q92617 AC091390.4-202ENST00000476426 537 ntBASIC14.64□□□□□ -0.07
NPIPB3Q92617 RPS2P4-201ENST00000476944 856 ntBASIC14.64□□□□□ -0.07
NPIPB3Q92617 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB3Q92617 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB3Q92617 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPIPB3Q92617 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB3Q92617 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPB3Q92617 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB3Q92617 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPB3Q92617 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPB3Q92617 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms