Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 GNAS-203ENST00000306120 1878 ntBASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 PRORSD1P-202ENST00000563365 2154 ntBASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB40AQ8WXH6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB40AQ8WXH6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 AL353807.1-201ENST00000427475 662 ntBASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 SNORA78-201ENST00000459373 127 ntBASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 AL049637.2-201ENST00000641778 930 ntBASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB40AQ8WXH6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 HTR7P1-201ENST00000538670 1336 ntBASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB40AQ8WXH6 YBX1P10-201ENST00000444752 975 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms