Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 KSR1P1-201ENST00000446298 240 ntBASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC44A1Q8WWI5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 FLJ13224-201ENST00000313737 1514 ntBASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 AC008040.2-201ENST00000461049 708 ntBASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC44A1Q8WWI5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 AP002982.1-201ENST00000492365 877 ntBASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 AC011298.2-201ENST00000617989 482 ntBASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC44A1Q8WWI5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC44A1Q8WWI5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 AC026271.3-201ENST00000571884 352 ntBASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 RN7SL471P-201ENST00000580476 299 ntBASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC44A1Q8WWI5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SLC44A1Q8WWI5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms