Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 GPAT2P1-201ENST00000444924 1672 ntBASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AL023284.2-201ENST00000405850 579 ntBASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 ECEL1P2-202ENST00000465689 757 ntBASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 MIR4674-201ENST00000582457 87 ntBASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLL1Q8TB92 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 AL512604.3-201ENST00000569583 964 ntBASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLL1Q8TB92 HEIH-201ENST00000623091 1652 ntBASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 AL499627.1-201ENST00000569373 2188 ntBASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 WWOX-216ENST00000569818 525 ntBASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 RCC2P3-201ENST00000418112 1537 ntBASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 AC008764.6-201ENST00000595909 2069 ntBASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.18■□□□□ 0.5
HMGCLL1Q8TB92 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMGCLL1Q8TB92 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms