Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 MYC-208ENST00000641036 567 ntBASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 AL162741.1-201ENST00000565563 1558 ntBASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMARCC2Q8TAQ2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC2Q8TAQ2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SMARCC2Q8TAQ2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 MIR564-202ENST00000385049 94 ntBASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCC2Q8TAQ2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 MIR1224-201ENST00000408193 85 ntBASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 MIR4674-201ENST00000582457 87 ntBASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SMARCC2Q8TAQ2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms