Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 TSPY19P-201ENST00000418461 509 ntBASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 TSPY18P-201ENST00000441642 509 ntBASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 AL023803.3-201ENST00000615559 522 ntBASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC17A8Q8NDX2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC17A8Q8NDX2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 POLD2P1-201ENST00000511220 997 ntBASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC17A8Q8NDX2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 TSSC2-201ENST00000450217 709 ntBASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 AL353719.1-201ENST00000566847 864 ntBASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 AL121772.3-201ENST00000610840 674 ntBASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 AC083906.6-201ENST00000641366 219 ntBASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC17A8Q8NDX2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 KRT8P32-201ENST00000512863 1461 ntBASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC17A8Q8NDX2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC17A8Q8NDX2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms