Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RETREG2Q8NC44 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 AC093525.10-201ENST00000625130 1569 ntBASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RETREG2Q8NC44 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 AC034232.1-201ENST00000506026 1064 ntBASIC20.97■□□□□ 0.95
RETREG2Q8NC44 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RETREG2Q8NC44 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 AL031598.1-201ENST00000561511 1773 ntBASIC20.96■□□□□ 0.95
RETREG2Q8NC44 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 CR769767.2-201ENST00000622735 460 ntBASIC20.96■□□□□ 0.95
RETREG2Q8NC44 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 NEFHP1-201ENST00000412845 2629 ntBASIC20.96■□□□□ 0.95
RETREG2Q8NC44 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RETREG2Q8NC44 FP475955.4-201ENST00000623131 1990 ntBASIC20.96■□□□□ 0.95
RETREG2Q8NC44 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RETREG2Q8NC44 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RETREG2Q8NC44 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RETREG2Q8NC44 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RETREG2Q8NC44 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms