Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 SDHAP2-201ENST00000455183 2001 ntBASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LINC01555Q8NAE3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 MIR149-201ENST00000384879 89 ntBASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 AL031133.1-201ENST00000406807 723 ntBASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 AL671277.2-201ENST00000458060 996 ntBASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 AC083849.1-201ENST00000615227 514 ntBASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC01555Q8NAE3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 AC073592.3-201ENST00000625118 1834 ntBASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 HBZP1-201ENST00000354915 429 ntBASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 SPDYE13P-201ENST00000445314 798 ntBASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 AC009102.3-201ENST00000623118 1491 ntBASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC01555Q8NAE3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 AL391807.1-203ENST00000604392 2365 ntBASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 PVRIG2P-201ENST00000435460 978 ntBASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 AC009065.1-201ENST00000564055 1225 ntBASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC01555Q8NAE3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms